Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015869444.1_cds_XP_016433749.1_29876
CDS Infomation

[gene=LOC107760245] [db_xref=GeneID:107760245] [protein=protein FRIGIDA-ESSENTIAL 1-like] [protein_id=XP_016433749.1] [location=join(15175..15406,25730..25903,26032..26236,26378..26574,26668..27836,27924..27953)] [gbkey=CDS]
Sequence

ATGCCCCGATACTCATCGGTTGCGGTGGCTGATCCACTAAACAACAACTCAATCCCGATA
CCCAAATCCTCTGTTAACGTGGACGAGTATGCGCCTTCTATACCGCAATTTCCTTTAGTT
CCAGTATTAATTGCATCACAGTACGAAGAAATTGAGGTTGAAGAAGCAACTAAAAACAGA
GAAGAAAATAGTGAAGGATTAGCTCCACTCCACGAAGAAAATCATAAAAAAGATGGAACC
CACATTCTGGAGCCTGTGGGTCTTGAAGAGCACTTAAGATCAGGAATTTCTACTCCAAAA
CAATCTGTAGTAAATCCTGATACCACTATGCTTGAAGAGGGTAGTGGCAGTTGCAGAATA
TCTAATTCAGATGAAAGAAGAGAAAAGAATGATTCAAGTTTGGATGGAAAAAGAATGGTC
GTGCTTTCTGATCCTCAAGCTCTTAGATACAGTGGGAAAAGGATAACCCATGTAATCCAG
CCTTTTGATCATGAAGCAAGTGCTGATATAGTAAATAGTGATGCTTCTAGCAAGGAAGTT
ATTGGTGCCCAATTCTCTGAAGGAGGAGGTCATCAAGAAGCGTCTGAGGATTTACGACAG
ACATCATCAAGGTTGGATGTTCCGAAGATTAGGCTAAGAAGTTTGTCCCCTGCTGATGAT
TCTAGTGGTGGAAATAAAAGACCAGCAGATAGAAGTGAGTTTTACTCTAGAAGTTGGTGC
ATCAAAGGAAGGGATCCTCTAACTAGCCATGATAATGACGGTGTTTTAGATGCTGCAAAG
ATGAAAAGCAAACTCATAGATGGAGAAGGTTCAAAAAATACCACTGAAAGACTAGCAGCA
GATTGTTTTTCTGATTTGGCACCATCTGCAGTTCGATGTGGAGAAAATCAAAGGTTGAAT
AGTGACATTGAATTGCATATGCATAGCGATGAGCATCGGTCAAACATACCGTTTAGAGAC
ATCGAAAGGGAGACTCTTGGATGTAAACCCTACTTGGCTGGTTATGGAAGCTCTTCATCA
CTATTACTCAAAGATGATTCTCTTAATAAAGATAGCTATCATAGTGGAGTGCTTCTAAGT
AGCTCAGTACTGTCATCTTACAAGTATCAGAACGCTGAAGTTCCGTCTTATAGCTCAGTT
TTGGACGACACGAGTTATAAGAGGTCCCAGCTTATACTCGGAAATCATCATTATCCACAC
TTGAATCACTCTGTGGATAGGTGGCCTTCTTATCTTACTTCTTCTTCAAACCTAGATCCG
GTTAGTGATCAGAAGCTTTTAGACCATAGTCGAGCATATTGTTCTTCTAGGTCAATCTCA
AACAAGTCTTCAGCACTTCCTGGTTCTGGAACTGAGCCTTTCTCTTGGACTGATTTATCA
AGGGACATGGAACACTCACGTGATTATAAGACCAAGGTGTATTTTGATGACTGGAAGCCT
TCTGTGCCTTTTCAACCATCAACCTTTCTTAGTCAAATTATTCCCCCTCCAGAAAGTCTG
TATGATCCGATTCGTGATAGCATTGAGCAAACCAGCGCAGCAGAGAAAGATTTGACTGCC
GATGAAAGAGAAACAACTGATAGAGCTACAACTCATCAAGAAAACGTGAATACCTCTTCA
AAAGAAGAAAAACACCCAAGACCAGTTAATCCCAGAGGCCAAAAAAGGACACAATCAAAA
TTAGAGAGGCCCAGACACAACTATGAAATTGATAATGACTTTAGGAGAGATGGATCTGTG
AACTATGAATCAGGAGTTTTGAAGCATTTTCGTGCTGCTCTTGTGGAATTCGTCAAAGAA
TTGCTGAAGCCAACTTGGCATGAAGGTCTCTTGATTAGGGATGCATATAAGATGATTGTT
AAGAAATCAGTAGATAAGGTCATTAACTCTTTGCAACCTGATCAAATTCCTGATACGACT
GAATCCATTAAGCAGTATCTCTCTGTTTCTAAGCCAAAAGTAGCTAAGCTCATTGAGGGG
TATGTGGAGAAATATGGAAAATCTTGA

Peptide Sequence

PEP ID

XP_016433749.1
PEP Infomation

PREDICTED: protein FRIGIDA-ESSENTIAL 1-like [Nicotiana tabacum]
Sequence

MPRYSSVAVADPLNNNSIPIPKSSVNVDEYAPSIPQFPLVPVLIASQYEEIEVEEATKNR
EENSEGLAPLHEENHKKDGTHILEPVGLEEHLRSGISTPKQSVVNPDTTMLEEGSGSCRI
SNSDERREKNDSSLDGKRMVVLSDPQALRYSGKRITHVIQPFDHEASADIVNSDASSKEV
IGAQFSEGGGHQEASEDLRQTSSRLDVPKIRLRSLSPADDSSGGNKRPADRSEFYSRSWC
IKGRDPLTSHDNDGVLDAAKMKSKLIDGEGSKNTTERLAADCFSDLAPSAVRCGENQRLN
SDIELHMHSDEHRSNIPFRDIERETLGCKPYLAGYGSSSSLLLKDDSLNKDSYHSGVLLS
SSVLSSYKYQNAEVPSYSSVLDDTSYKRSQLILGNHHYPHLNHSVDRWPSYLTSSSNLDP
VSDQKLLDHSRAYCSSRSISNKSSALPGSGTEPFSWTDLSRDMEHSRDYKTKVYFDDWKP
SVPFQPSTFLSQIIPPPESLYDPIRDSIEQTSAAEKDLTADERETTDRATTHQENVNTSS
KEEKHPRPVNPRGQKRTQSKLERPRHNYEIDNDFRRDGSVNYESGVLKHFRAALVEFVKE
LLKPTWHEGLLIRDAYKMIVKKSVDKVINSLQPDQIPDTTESIKQYLSVSKPKVAKLIEG
YVEKYGKS

Transcript Sequence

Gene sequence data has not been registered.